Name: 62466786_s45 mvar
Variants: 87273
Novel Variants: 8157 (Not in latest DbSNP Build)
| Type | Total Variants |
|---|---|
| CODON_CHANGE_PLUS_CODON_DELETION | 72 |
| CODON_CHANGE_PLUS_CODON_INSERTION | 99 |
| CODON_DELETION | 133 |
| CODON_INSERTION | 131 |
| FRAME_SHIFT | 146 |
| FRAME_SHIFT+NON_SYNONYMOUS_CODING | 1 |
| FRAME_SHIFT+SPLICE_SITE_REGION | 46 |
| FRAME_SHIFT+START_LOST | 1 |
| FRAME_SHIFT+STOP_GAINED | 3 |
| FRAME_SHIFT+STOP_GAINED+SPLICE_SITE_REGION | 2 |
| FRAME_SHIFT+STOP_LOST | 4 |
| GENE_FUSION | 1 |
| MOTIF_DELETED | 2 |
| MOTIF[MA0003.1:Ap2alpha] | 16 |
| MOTIF[MA0014.1:Pax5] | 2 |
| MOTIF[MA0016.1:RXRA] | 2 |
| MOTIF[MA0024.1:E2F1] | 2 |
| MOTIF[MA0035.2:Gata1] | 1 |
| MOTIF[MA0058.1:Max] | 10 |
| MOTIF[MA0059.1:Cmyc] | 2 |
| MOTIF[MA0062.1:Gabp] | 5 |
| MOTIF[MA0062.2:Gabp] | 16 |
| MOTIF[MA0065.1:PPARG] | 1 |
| MOTIF[MA0065.2:PPARG] | 1 |
| MOTIF[MA0079.1:SP1] | 2 |
| MOTIF[MA0079.2:SP1] | 11 |
| MOTIF[MA0080.2:PU1] | 2 |
| MOTIF[MA0093.1:USF1] | 1 |
| MOTIF[MA0095.1:Yy1] | 7 |
| MOTIF[MA0099.1:Cfos] | 1 |
| MOTIF[MA0099.2:AP1] | 1 |
| MOTIF[MA0105.1:NFKB] | 1 |
| MOTIF[MA0114.1:HNF4A] | 2 |
| MOTIF[MA0138.2:Nrsf] | 2 |
| MOTIF[MA0139.1:CTCF] | 59 |
| MOTIF[MA0147.1:Cmyc] | 2 |
| MOTIF[MA0148.1:FOXA1] | 2 |
| MOTIF[MA0159.1:RXR] | 1 |
| MOTIF[MA0162.1:Egr1] | 15 |
| NON_SYNONYMOUS_CODING | 11787 |
| NON_SYNONYMOUS_CODING+CODON_DELETION | 1 |
| NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION | 241 |
| NON_SYNONYMOUS_START | 2 |
| PROTEIN_PROTEIN_INTERACTION_LOCUS | 5 |
| PROTEIN_STRUCTURAL_INTERACTION_LOCUS | 265 |
| SPLICE_SITE_REGION | 30 |
| SPLICE_SITE_REGION+CODON_CHANGE_PLUS_CODON_DELETION | 1 |
| SPLICE_SITE_REGION+CODON_DELETION | 2 |
| SPLICE_SITE_REGION+SYNONYMOUS_CODING | 248 |
| START_GAINED | 195 |
| START_LOST | 14 |
| START_LOST+CODON_CHANGE_PLUS_CODON_INSERTION | 3 |
| START_LOST+CODON_INSERTION | 1 |
| STOP_GAINED | 116 |
| STOP_GAINED+CODON_CHANGE_PLUS_CODON_INSERTION | 1 |
| STOP_GAINED+CODON_INSERTION | 3 |
| STOP_GAINED+SPLICE_SITE_REGION | 1 |
| STOP_GAINED+SPLICE_SITE_REGION+CODON_INSERTION | 2 |
| STOP_LOST | 24 |
| STOP_LOST+CODON_DELETION | 1 |
| STOP_LOST+SPLICE_SITE_REGION | 5 |
| SYNONYMOUS_CODING | 11983 |
| SYNONYMOUS_CODING+CODON_DELETION | 1 |
| SYNONYMOUS_STOP | 13 |
| TRANSCRIPT | 1 |
| None | 0 |
| Type | Total Variants |
|---|---|
| PASS | 87273 |
| Quality | Value |
|---|---|
| Min | 10.02 |
| Average | 1768.84550009786 |
| Max | 64952.8 |
| Read Depth | Value |
|---|---|
| Min | 0 |
| Average | 0.0 |
| Max | 0 |
| Type | Total Variants |
|---|---|
| None | 0 |