+ Filter Options

SELECT VARIANTS FROM EXCLUDE VARIANTS FROM
INDIVIDUALS:

SNP LIST:
 GROUPS:

SAVED GENE LIST:

GENE LIST:
INDIVIDUALS:

EXCLUDE SNP LIST:
 EXCLUDE GROUPS:

EXCLUDE SAVED GENE LIST:

EXCLUDE GENE LIST:
SELECT YOUR DISEASES:
OMIM:
CLINICAL GENOMICS DATABASE:
HGMD:
MUTATION TYPE:
 CHR:

POS:
VARIANT EFFECT FUNCTIONAL CLASS IMPACT
DBSNP BUILD:


EXCLUDE VARIANTS AT VARISNP 		READ DEPTH:

QUAL:
VARIANTS PER GENE:
SHOW ONLY VARIANTS PRESENT IN COMMON GENES BETWEEN ALL THE INDIVIDUALS SELECTED
SHOW ONLY VARIANTS AT EXACTLY SAME POSITION BETWEEN ALL THE INDIVIDUALS SELECTED
EXCLUDE ALL VARIANTS PRESENT IN LATEST DBSNP BUILD
SHOW ONLY VARIANTS PRESENT AT HGMD

FREQUENCIES

1000 GENOMES FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN 1000GENOMES 		DBSNP FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN DBSNP 		ESP6500 FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN EXOME SEQUENCING PROJECT

SCORES

SIFT SCORE

EXCLUDE VARIANTS WITHOUT SIFT SCORE 		POLYPHEN2 SCORE

EXCLUDE VARIANTS WITHOUT POLYPHEN SCORE
CADD

EXCLUDE VARIANTS WITHOUT CADD SCORE 		MCAP

EXCLUDE VARIANTS WITHOUT M-CAP SCORE
OPEN RESULT IN A NEW WINDOW
RESET FILTER | Save Config | Save Analysis

+ Genes

Genes:

+ Genes associated with diseases

Genes at Omim

Genes at Clinical Genomics Database

Genes at HGMD

Summary

Number of Variants: 47
Number of Genes: 0

Export to: CSV
  • Page 1 of 1
Omim - GeneCards - NCBI
Options Individual Chr
 RsId
 Pos
 Qual
 Ref
 Alt
 Filter Gen
 Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View wes08-paw final 22 . 23152646 276.77 T G PASS 0/1 23 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None None
View wes08-paw final 19 . 7633434 374.77 C T PASS 0/1 24 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None None
View wes08-paw final 17 . 80855575 526.77 G A PASS 0/1 35 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None TBCD|0.013900212|77.94%
View wes08-paw final 17 . 76311656 663.77 T C PASS 0/1 52 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None None
View wes08-paw final 17 . 59914784 163.73 TATC T PASS 0/1 8 MOTIF[MA0139.1:CTCF] LOW None None None None None None BRIP1|0.463785702|17.47%
View wes08-paw final 17 . 11701281 155.77 T A PASS 0/1 10 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None DNAH9|0.176098085|39.51%
View wes08-paw final 14 . 106627206 1167.77 C G PASS 0/1 126 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None None
View wes08-paw final 14 . 106627169 826.77 G A PASS 0/1 73 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None None
View wes08-paw final 14 . 106627146 489.77 C G PASS 0/1 63 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None None
View wes08-paw final 14 . 106627133 477.77 C A PASS 0/1 55 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None None
View wes08-paw final 14 . 106627121 1095.77 T A PASS 0/1 47 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None None
View wes08-paw final 9 . 135777415 620.77 G A PASS 0/1 48 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None TSC1|0.596037841|11.9%
View wes08-paw final 8 . 144414202 865.77 C T PASS 1/1 27 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None TOP1MT|0.006768719|83.74%
View wes08-paw final 8 . 144313795 79.28 C T PASS 1/1 3 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None None
View wes08-paw final 8 . 130904072 672.77 A G PASS 0/1 52 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None FAM49B|0.747053838|7.17%
View wes08-paw final 8 . 10834849 362.77 C T PASS 0/1 31 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None XKR6|0.452427379|18.08%
View wes08-paw final 7 . 139138016 96.28 A G PASS 1/1 3 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None KLRG2|0.003537072|87.72%
View wes08-paw final 6 . 116433293 47.28 G T PASS 1/1 3 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None NT5DC1|0.063720082|58.95%
View wes08-paw final 6 . 52072048 652.77 T C PASS 0/1 42 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None None
View wes08-paw final 3 . 75669116 85.77 G T MG_SNP_Filter 0/1 51 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None None
View wes08-paw final 3 . 75669111 130.77 C A PASS 0/1 46 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None None
View wes08-paw final 3 . 75669106 19.81 C T MG_SNP_Filter 0/1 42 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None None
View wes08-paw final 3 rs943102057
dbSNP Clinvar 		42785945 593.77 C T PASS 1/1 20 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None CCDC13|0.02751687|70.65%
View wes08-paw final 3 . 9890653 256.77 G C PASS 0/1 16 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None TTLL3|0.034571307|67.6%
View wes08-paw final 1 . 43609556 1210.77 T C PASS 1/1 38 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None None
View wes08-paw final 19 . 18388428 891.77 G T PASS 0/1 79 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None None
View wes08-paw final 19 . 1244519 121.77 G C PASS 0/1 11 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None ATP5D|0.031807331|68.69%
View wes08-paw final 17 . 46337241 156.84 G C MG_SNP_Filter 1/1 6 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None SKAP1|0.8913272|3.64%
View wes08-paw final 16 . 89199058 1169.77 A G PASS 1/1 38 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None ACSF3|0.012049699|79.2%
View wes08-paw final 16 . 88882563 636.73 GG... G PASS 1/1 15 MOTIF[MA0139.1:CTCF] LOW None None None None None None GALNS|0.039457291|65.94%
View wes08-paw final 16 . 2000345 487.77 A G PASS 0/1 28 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None RPL3L|0.110544963|49.1%
View wes08-paw final 14 . 88480278 1025.77 G A PASS 0/1 62 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None None
View wes08-paw final 8 . 63015528 38.77 C T PASS 0/1 4 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None None
View wes08-paw final 7 . 128858576 412.73 TA... T PASS 0/1 15 MOTIF[MA0139.1:CTCF] LOW None None None None None None None
View wes08-paw final 6 . 33086504 253.77 G A PASS 0/1 26 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None None
View wes08-paw final 6 . 33086503 253.77 T C PASS 0/1 26 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None None
View wes08-paw final 3 . 52833272 1497.77 A T PASS 1/1 54 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None ITIH3|0.073451292|56.66%
View wes08-paw final 2 . 31261468 668.77 G A PASS 1/1 18 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None GALNT14|0.148624804|43.2%
View wes08-paw final 1 . 209801183 173.73 C CA PASS 0/1 7 MOTIF[MA0139.1:CTCF] LOW None None None None None None LAMB3|0.064905565|58.67%
View wes08-paw final 17 . 21416431 2126.77 A G PASS 0/1 174 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None None
View wes08-paw final 14 . 106675047 47.77 A G MG_SNP_Filter 0/1 79 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None None
View wes08-paw final 11 . 3362732 191.84 T C PASS 1/1 6 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None ZNF195|0.000866882|96.25%
View wes08-paw final 9 . 134731688 1300.77 C T PASS 1/1 41 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None None
View wes08-paw final 4 . 108655466 488.73 C CA... PASS 1/1 12 MOTIF[MA0139.1:CTCF] LOW None None None None None None None
View wes08-paw final 1 . 64602955 924.77 T C PASS 1/1 30 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None ROR1|0.640295126|10.45%
View wes08-paw final 1 . 60039906 432.77 A G PASS 1/1 15 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None FGGY|0.413612301|19.95%
View wes08-paw final 1 . 12882578 893.77 G A PASS 0/1 37 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None None
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